BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004A05SP1|AL425213
(608 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1389 1203 0.0
>3x_Contig1389
Length = 7926
Score = 1203 bits (606), Expect = 0.0
Identities = 607/608 (99%)
Strand = Plus / Plus
Query: 1 ccttatgcacttcctccatgttctcacatgagagaccactacacacagtaacatggggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4298 ccttatgcacttcctccatgttctcacatgagagaccactacacacagtaacatggggct 4357
Query: 61 caaatacaggagaattcgggaataaagtttgtaatgactctatcagagttttaaaagtct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4358 caaatacaggagaattcgggaataaagtttgtaatgactctatcagagttttaaaagtct 4417
Query: 121 catattcaggactgtgtccatatggacataaccatagagatatacccattcttccctaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4418 catattcaggactgtgtccatatggacataaccatagagatatacccattcttccctaat 4477
Query: 181 tgagcacaagcaggataatatagggatagtttagccgagtaaggtcactaagtattccct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4478 tgagcacaagcaggataatatagggatagtttagccgagtaaggtcactaagtattccct 4537
Query: 241 gacagcaacaaaagaaattgacaagtttagcttataagtatgtcaatcttcaacctttga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4538 gacagcaacaaaagaaattgacaagtttagcttataagtatgtcaatcttcaacctttga 4597
Query: 301 atagtgaaagtacccttgaatactgtcctgttcaaagttcttgtccctatatgtaatgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4598 atagtgaaagtacccttgaatactgtcctgttcaaagttcttgtccctatatgtaatgat 4657
Query: 361 aagttcatcattatcgaaagagcgttttttttttttttttgaatgtaaagaagttgacat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4658 aagttcatcattatcgaaagagcgttttttttttttttttgaatgtaaagaagttgacat 4717
Query: 421 tagaaaacaacaaaatatcgccggtttcatcactcccacaagtagaagaagagcgaaaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4718 tagaaaacaacaaaatatcgccggtttcatcactcccacaagtagaagaagagcgaaaaa 4777
Query: 481 actgggttataacagttgagaagcacattcaggccaggaaaccagcttcaagaggatggc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4778 actgggttataacagttgagaagcacattcaggccaggaaaccagcttcaagaggatggc 4837
Query: 541 atccactttacaggtttcgtcacgaaagtgtaagaactgtggttcgacggattttgtccg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4838 atccactttacaggtttcgtcacgaaagtgtaagaactgtggttcgacggattttgtccg 4897
Query: 601 tkatatta 608
| ||||||
Sbjct: 4898 tgatatta 4905
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,374
Number of Sequences: 1807
Number of extensions: 14374
Number of successful extensions: 3452
Number of sequences better than 1.0e-20: 1
length of query: 608
length of database: 10,358,551
effective HSP length: 16
effective length of query: 592
effective length of database: 10,329,639
effective search space: 6115146288
effective search space used: 6115146288
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)